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Isolation and Diversity of Actinomycetes from Sediments of Different Depths Between 34 m and 3,235 m in South China Sea


Paper Type 
 Contributed Paper
Title 
 Isolation and Diversity of Actinomycetes from Sediments of Different Depths Between 34 m and 3,235 m in South China Sea
Author 
 Manita Kamjam, Qinqyi Xie, Zixin Deng and Kui Hong
Email 
 kuihong31@whu.edu.cn
Abstract:
 

Diversity and isolation of actinomycetes from marine sediments collected from the South China Sea at depths ranging from 34 to 3,235 m were carried using dilution plate technique with heat and non-heat pretreatment on 9 isolation media, and plate stamping technique incubated on RH and M6 media at 28 °C and 10 °C.  A total of 43 actinomycete strains were isolated from the different depth of marine sediments, among of which 32 were from the deep sea samples (1,645-3,235 m). Non-heat pretreatment was effective for the actinomycete isolation from deep sea sediment samples. RH and M6 were the more effective media regarding the number and diversity of isolates recovered. A higher percentage of actinomycete colonies (19.64%) were obtained by using plate stamping technique comparing to dilution plate method (5.29%). However, low-temperature incubation (10 °C) was also significantly effective on actinomycetes isolation from deep-sea samples with a higher percentage of the ratio actinomycetes to other total viable bacteria.  Higher diversity of actinomycetes genera were found in deep-sea regions (depth 1,645 m-3,235 m) comparing to shallow regions marine sediments (depth <200 m). Partial 16S rRNA gene sequence data revealed that the isolates belong to the Class Actinobacteria, with genetic affiliations to five orders, six families, and six genera. Micromonospora (n= 23) and Streptomyces (n= 14) were the dominant genera, followed by Dietzia (n= 2), Tsukamurella (n=2), Blastococcus (n=1) and Microbacterium (n=1).

Start & End Page 
 1595 - 1609
Received Date 
 2017-09-08
Revised Date 
Accepted Date 
 2018-01-29
Full Text 
   Download
Keyword 
 marine actinomycetes, isolation, diversity, deep sea
Volume 
 Vol.45 No.4 (July 2018)
DOI 
Citation 
 Kamjam M., Xie Q., Deng Z. and Hong K., Isolation and Diversity of Actinomycetes from Sediments of Different Depths Between 34 m and 3,235 m in South China Sea, Chiang Mai Journal of Science, 2018; 45(4): 1595-1609.
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