Chiang Mai Journal of Science

Print ISSN: 0125-2526 | eISSN : 2465-3845

1,647
Articles
Q3 0.80
Impact Factor
Q3 1.3
CiteScore
7 days
Avg. First Decision

Variation Under Nature: A Sesquicentennial DNA Barcoding Perspective

J. William O. Ballard, Louise Puslednik, Jonci N. Wolff, and Richard C. Russell
* Author for corresponding; e-mail address: w.ballard@unsw.edu.au
Volume: Vol.36 No.2 (MAY 2009)
Short Communication
DOI:
Received: -, Revised: -, Accepted: -, Published: -

Citation: Ballard J.W.O., Puslednik L., Wolff J.N. and Russell R.C., Variation Under Nature: A Sesquicentennial DNA Barcoding Perspective, Chiang Mai Journal of Science, 2009; 36(2): 188-199.

Abstract

Darwin’s classic reference to the “tangled bank” acknowledges the living biodiversity. Traditionally, biodiversity assessment has been the realm of  the classical taxonomist. However, times have changed swiftly and now biodiversity may be assessed by high throughput sequencing of  short regions of  DNA. Commonly, this is called DNA “barcoding”.  In this study, we investigate the genetic diversity within and between four morphological mosquito species that are vectors of  medically important viral pathogens.  We obtained 627 bp of  sequence information from the N-terminus of  the mitochondrially encoded cytochrome  c oxidase I (COI) gene from 12 Aedes vigilax and 10 Ae. camptorhynchus representing five localities in Australia. We also downloaded GenBank COI sequence data from 18 Ae. albopictus and 14 Ae. aegypti. Maximum likelihood phylogenetic analyses recovered the four distinct morphological species, as well as a distinct lineage within what is currently described as Ae. vigilax. We termed this lineage ‘A’. Intra- and interspecific variation quantified for Ae. vigilax and Ae. vigilax lineage ‘A’ suggest that this morphospecies may include distinct genetic or cryptic species. Ae. aegypti also had high intraspecific variation, however, we concluded that this is most likely due to the large effective population size of  this species and its broad distribution through the tropics. Phylogenetic analyses and analyses of  genetic diversity at COI suggests that Ae. camptorhynchus and Ae. albopictus are robust species. The results of  this study highlight the efficiency, utility and ease of  barcoding.  The study also documents specific limitations including the importance of taxon sampling and the necessity for this tool to be used in conjunction with additional taxonomic techniques, ecological studies and physiological data.

Keywords: Barcode, Mosquito, Diversity, Aedes vigilax

Related Articles

Biodiversity of Aquatic Insects and Water Quality Parameters in Thac Bac Stream, Tam Dao National Park, Vietnam
DOI: 10.12982/CMJS.2024.092.

Hieu Van Nguyen, Cuong Van Duong, Nattawut Sareein, Christine Jewel C. Uy-Yabut, Anh Duc Tran and Vinh Van Nguyen

Vol.51 No.6 (November 2024)
Research Article View: 1,148 Download: 543
Diversity and Abundance of Non-Geniculate Coralline Algae (NGCA) in Different Reef Conditions and Depth Zones
DOI: 10.12982/CMJS.2024.050.

Kattika Pattarach, Shao-Lun Liu and Jaruwan Mayakun

Vol.51 No.3 (May 2024)
Research Article View: 1,421 Download: 322
Diversity of Yeasts from Food Waste and Their Potential for Thermotolerance and Hydrolytic Enzyme Production
DOI: 10.12982/CMJS.2024.012.

Jemisha Dudhat, Napapohn Kajadpai, Jirameth Angchuan, Varunya Sakpuntoon and Nantana Srisuk

Vol.51 No.1 (January 2024)
Research Article View: 1,883 Download: 872
Two Novel Records of Agaricus (Agaricaceae, Agaricales) from Southwest China
DOI: 10.12982/CMJS.2023.061.

Wen-Hua Lu, Saowaluck Tibpromma, Jaturong Kumla, Dong-Qin Dai, Samantha C. Karunarathna and Xiao-Yan Wang

Vol.50 No.6 (November 2023)
Research Article View: 1,852 Download: 492
New Species of Cercosporoid on Mango in Thailand
DOI: 10.12982/CMJS.2022.053.

Nisachon Tamakaew, Anuruddha Karunarathna, Parichad Pakdeeniti, Patchareeya Withee, Chanokned Senwanna, Sukanya Haituk and Ratchadawan Cheewangkoon

Vol.49 No.3 (Special Issue II : May 2022)
Research Article View: 1,865 Download: 1,640
Two Pleurotus Species (Pleurotaceae) From Lao People’s Democratic Republic
page: 1224 - 1235

Monthien Phonemany, Olivier Raspé, Phongeun Sysouphanthong, Allen Grace T. Niego, Naritsada Thongklang, Boontiya Chuankid and Kevin D. Hyde

Vol.48 No.5 (September 2021)
Research Article View: 2,347 Download: 532
Isolation and Diversity of Actinomycetes from Sediments of Different Depths Between 34 m and 3,235 m in South China Sea
page: 1595 - 1609

Manita Kamjam, Qinqyi Xie, Zixin Deng and Kui Hong

Vol.45 No.4 (July 2018)
Research Article View: 1,511 Download: 428
Diversity of Endophytic Fungi Isolated from Thai Medicinal Plants (Casearia grewiifolia) in Khon Kaen, Thailand, and their Bioactive Compounds
page: 45 - 59

Natanong Yodsing, Somdej Kanokmedhakul, Wiyada Mongkolthanaruk, Tadanori Aimi, Totsaporn Srisapoomi and Sophon Boonlue

Vol.45 No.1 (January 2018)
Research Article View: 1,468 Download: 674
Diversity and Plant Growth Promoting Activities of Actinomycetes from Mangroves
page: 1210 - 1223

Paweena Suksaard, Wasu Pathom-aree and Kannika Duangmal

Vol.44 No.4 (October 2017)
Research Article View: 1,717 Download: 571
Diversity of Polychaetes in Mangrove Forest, Prasae Estuary, Rayong Province, Thailand
page: 816 - 823

Somtawin Jaritkhuan*, Pongrat Damrongrojwattana, Benchawan Chewprecha and Vichaya Kunbou

Vol.44 No.3 (July 2017)
Research Article View: 1,412 Download: 550
The genus Hyboella Hancock in Thailand (Orthoptera: Tetrigidae: Metrodorinae)
page: 125 - 131

Ling-sheng Zha, Ting-chi Wen, Ji-chuan Kang*, Kevin D. Hyde

Vol.44 No.1 (JANUARY 2017)
Research Article View: 1,586 Download: 358
An Investigation on North Adana (Turkey) Myxomycetes
page: 54 - 67

Hayri Baba* [a], Murat Zmre [a], Muharrem Gelen [a]

Vol.43 No.1 (JANUARY 2016)
Research Article View: 1,535 Download: 328
Phylogenetic Diversity of Russula from Xiaozhongdian, Yunnan, China, Inferred from Internal Transcribed Spacer Sequence Data
page: 811 - 821

Jiayu Guo, Samantha C. Karunarathna, Peter E. Mortimer*, Jianchu Xu and Kevin D. Hyde

Vol.41 No.4 (SPECIAL ISSUE 1)
Research Article View: 1,491 Download: 401
Distribution and Taxonomy of Genus Aconitum in Kashmir: Potent Medicinal Resource of Himalayan Valley
page: 173 - 186

Neelofar Jabeen, Mohammad l Kozgar, Ghulam H. Dar, Abdul S. Shawl and Samiullah Khan

Vol.40 No.2 (APRIL 2013)
Research Article View: 1,455 Download: 277
Diversity of Aquatic Insects and Their Functional Feeding Group from Anthropogenically Disturbed Streams in Mae Sot District, Tak Province, Thailand
page: 399 - 409

Isara Thanee and Chitchol Phalaraksh*

Vol.39 No.3 (JULY 2012)
Research Article View: 1,627 Download: 384
Diversity of Figs and Their Pollinators in Chiang Mai Province, Thailand
page: 638 - 647

Yaowanit Tarachai, Prachaval Sukumalanand, Prasit Wangpakapattanawong, Stephen G. Compton and

Vol.38 No.4 (OCTOBER 2011)
Research Article View: 1,657 Download: 324
Outline
Figures