Strong fluctuations in DNA Unzipping
Sitichoke Amnuanpol** Author for corresponding; e-mail address: sitichok@tu.ac.th
Volume: Vol.42 No.4 (OCTOBER 2015)
Research Article
DOI:
Received: 26 November 2013, Revised: -, Accepted: 7 March 2014, Published: -
Citation: Amnuanpol S., Strong fluctuations in DNA Unzipping, Chiang Mai Journal of Science, 2015; 42(4): 980-989.
Abstract
In a living cell two strands of nucleotides forming a double helix are unbound, in response to enzymatic force, to the independent strands. Such force-induced structural transformation of DNA is studied in the context of phase transition. Fluctuations around a double helix, which is the ground-state energy configuration, are so strong that the mean field description is no longer valid. Treating two strands of nucleotides as the one dimensional continuous entities interacting via a potential, the growth of the helix wavevector under recursion relations, derived by the momentum shell renormalization group, accounts for the rapidly spatial variation of two unbound strands.