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Proteomic Analysis of Deglycosylated Proteins in Normal Human Serum Using Anhydrous Hydrogen Fluoride Treatment


Paper Type 
Contributed Paper
Title 
Proteomic Analysis of Deglycosylated Proteins in Normal Human Serum Using Anhydrous Hydrogen Fluoride Treatment
Author 
Supawadee Sriyam, Supachok Sinchaikul, Payungsak Tantipaiboonwong, Suree Phutrakul and Shui-Tein Che
Email 
scchi007@chiangmai.ac.th; **e-mail: bcchen@gate.sinca.edu.tw
Abstract:
Deglycosylation with anhydrous hydrogen fluoride (HF) is an alternative method for removing oligosaccharides from glycoproteins which can be extremely useful for identification of proteins and the biological roles of post-translational modifications. In this study, a glycosylated proteome of human serum was treated by anhydrous HF to deglycosylate the number of oligosaccharides from glycoproteins which facilitated protein identification using proteomic analysis. In the preliminary result, the high performance liquid chromatography (HPLC)and liquid chromatography mass spectrometry (LC-MS) showed that there was no cleavage of disulfide bonds in HF- reated insulin as a negative control. The effect of HF deglycosylation on electrophoresis pattern was studied by resolving on one- imensional (1-D) and two-dimensional (2-D) gels. Deglycosylation of glycoproteins in human serum resulted in different protein patterns on 1-DE and 2- E gels with the clearer protein patterns and low amount of complexity. The deglycosylated serum proteins could be enriched and identified by MS analysis. Using this approach, it indicated that the proteins in human serum have some glycosylation that affected to the protein analysis and might possess the diverse biological functions. Therefore, this deglycosylation technique is an effective method to solve the problem of oligosaccharide interference in proteome analysis and be able to use for further glycan analysis.
Start & End Page 
311 - 323
Received Date 
2007-08-03
Revised Date 
Accepted Date 
2008-01-16
Full Text 
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Keyword 
glycoprotein, deglycosylation, anhydrous hydrogen fluoride, human serum, two-dimensional electrophoresis.
Volume 
Vol.35 No.2 (MAY 2008)
DOI 
Citation 
Sriyam S., Sinchaikul S., Tantipaiboonwong P., Phutrakul S. and Che S., Proteomic Analysis of Deglycosylated Proteins in Normal Human Serum Using Anhydrous Hydrogen Fluoride Treatment, Chiang Mai J. Sci., 2008; 35(2): 311-323.
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Chiang Mai Journal of Science

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